PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn339111
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family HB-other
Protein Properties Length: 240aa    MW: 26944.7 Da    PI: 8.1994
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn339111genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox36.58.5e-121041312754
                 HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  27 aeereeLAkklgLterqVkvWFqNrRak 54 
                 ++++++LA+kl+L  rqV vWFqNrRa+
  Achn339111 104 RKQKQDLARKLNLRPRQVEVWFQNRRAR 131
                 789************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003890.005987139IPR001356Homeobox domain
SuperFamilySSF466892.45E-9102131IPR009057Homeodomain-like
CDDcd000861.18E-8104131No hitNo description
Gene3DG3DSA:1.10.10.603.4E-10104131IPR009057Homeodomain-like
PROSITE profilePS5007111.774104135IPR001356Homeobox domain
PfamPF000463.0E-9104131IPR001356Homeobox domain
PfamPF021834.4E-10151185IPR003106Leucine zipper, homeobox-associated
SMARTSM003402.4E-24151194IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MGSDHDDISN TVLVLGLGFS PTSVQNPSKA DNQRPNNKPQ IFEPSLSLGL CGETYNRNTM  60
VAKESDWLVL YREESGASSF SNASVKRERE MGSEEVEIER VWGRKQKQDL ARKLNLRPRQ  120
VEVWFQNRRA RFVFTTSCDY TLGFILRTKL KQTEVDCELL KKCCETLTDE NRRLQKEVQD  180
LKALKLAQPL YMATLTMCPS CELIGGGGGR DNTSNSPVLT MAPKTHFLIN PFSNPSTAC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099420.13e-83PREDICTED: homeobox-leucine zipper protein HAT22-like
SwissprotP466045e-52HAT22_ARATH; Homeobox-leucine zipper protein HAT22
TrEMBLA5B6267e-74A5B626_VITVI; Putative uncharacterized protein
STRINGVIT_00s0732g00010.t012e-73(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29024186
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.13e-53HD-ZIP family protein